Plant Primary Metabolism (Arabidopsis thaliana)

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H2Ophosphoglycerate mutase 1glycerate 2-phosphateglyceraldehyde 3-phosphate dehydrogenase 1fructose 1,6-bisphosphateoxaloacetateNAD+phosphoenolpyruvate carboxylase 4glycerate 1,3-bisphosphatePPi-dependent phosphofructokinase beta 1malic enzyme 1PPiphosphoglycerate kinaseHCO3-phosphoenolpyruvatefructose 6-phosphateenolase 2malatefructose 1,6-bisphosphate aldolaseNADHpyruvatepyruvate kinaseglycerate 3-phosphateDihydroxyacetone phosphateglyceraldahyde-3-phosphatetriose phosphate isomeraseNADPHNADP+ATPADPmalate dehydrogenase 2NADP+NADPHATPADPATP-dependent phosphofructokinase 1PiATPADPPiPiPPi-dependent phosphofructokinase beta 2PPi-dependent phosphofructokinase alpha 1PPi-dependent phosphofructokinase alpha 2ATP-dependent phosphofructokinase 2ATP-dependent phosphofructokinase 3ATP-dependent phosphofructokinase 6ATP-dependent phosphofructokinase 7glyceraldehyde 3-phosphate dehydrogenase 2phosphoglycerate mutase 2enolase 3phosphoenolpyruvate carboxylase 2phosphoenolpyruvate carboxylase 1phosphoenolpyruvate carboxylase 3malate dehydrogenase 1malic enzyme 2malic enzyme 3


Description

Plant Primary Metabolism Metapathway

Contains:

- Calvin Cycle (chloroplast) - Glycolysis (cytosol) - Krebs Cycle (mitochondria) - Chloroplastic Amino Acid Metabolism - Chloroplast Electron Transport Chain - Sucrose Metabolism - Starch Metabolism

The pathway is currently under construction and does not yet contain A. thaliana annotations.

Quality Tags

Ontology Terms

 

Bibliography

  1. Karve A, Rauh BL, Xia X, Kandasamy M, Meagher RB, Sheen J, Moore BD; ''Expression and evolutionary features of the hexokinase gene family in Arabidopsis.''; Planta, 2008 PubMed Europe PMC

History

CompareRevisionActionTimeUserComment
105907view11:40, 16 August 2019MkutmonHMDB identifier normalization
86019view18:18, 25 June 2016KhanspersModified description
84678view13:38, 15 March 2016Maria CeciliaNew pathway

External references

DataNodes

View all...
NameTypeDatabase referenceComment
ADPMetabolite
ATP-dependent phosphofructokinase 1ProteinQ9M0F9 (Uniprot-TrEMBL)
ATP-dependent phosphofructokinase 2ProteinQ9FIK0 (Uniprot-TrEMBL)
ATP-dependent phosphofructokinase 3ProteinQ94AA4 (Uniprot-TrEMBL)
ATP-dependent phosphofructokinase 6ProteinQ9M076 (Uniprot-TrEMBL)
ATP-dependent phosphofructokinase 7ProteinQ9C5J7 (Uniprot-TrEMBL)
ATPMetaboliteHMDB00538 (HMDB)
Dihydroxyacetone phosphateMetaboliteHMDB01473 (HMDB)
H2OMetabolite
HCO3-Metabolite
NAD+MetaboliteHMDB00902 (HMDB)
NADHMetaboliteHMDB01487 (HMDB)
NADP+MetaboliteHMDB00217 (HMDB)
NADP+MetaboliteHMDB00902 (HMDB)
NADPHMetaboliteHMDB00221 (HMDB)
NADPHMetaboliteHMDB01487 (HMDB)
PPiMetabolite
PPi-dependent phosphofructokinase alpha 1ProteinQ9SYP2 (Uniprot-TrEMBL)
PPi-dependent phosphofructokinase alpha 2ProteinQ9C9K3 (Uniprot-TrEMBL)
PPi-dependent phosphofructokinase beta 1ProteinQ8W4M5 (Uniprot-TrEMBL)
PPi-dependent phosphofructokinase beta 2ProteinF4JGR5 (Uniprot-TrEMBL)
PiMetabolite
enolase 2ProteinP25696 (Uniprot-TrEMBL)
enolase 3ProteinQ9ZW34 (Uniprot-TrEMBL)
fructose 1,6-bisphosphate aldolaseProteinP22197 (Uniprot-TrEMBL)
fructose 1,6-bisphosphateMetaboliteHMDB01058 (HMDB)
fructose 6-phosphateMetaboliteHMDB00124 (HMDB)
glyceraldahyde-3-phosphateMetabolite
glyceraldehyde 3-phosphate dehydrogenase 1ProteinP25858 (Uniprot-TrEMBL)
glyceraldehyde 3-phosphate dehydrogenase 2ProteinQ9FX54 (Uniprot-TrEMBL)
glycerate 1,3-bisphosphateMetabolite
glycerate 2-phosphateMetabolite
glycerate 3-phosphateMetabolite
malateMetabolite
malate dehydrogenase 1ProteinP93819 (Uniprot-TrEMBL)
malate dehydrogenase 2ProteinP57106 (Uniprot-TrEMBL)
malic enzyme 1ProteinO82191 (Uniprot-TrEMBL)
malic enzyme 2ProteinQ9LYG3 (Uniprot-TrEMBL)
malic enzyme 3ProteinQ9XGZ0 (Uniprot-TrEMBL)
oxaloacetateMetabolite
phosphoenolpyruvateMetabolite
phosphoenolpyruvate carboxylase 1ProteinQ9MAH0 (Uniprot-TrEMBL)
phosphoenolpyruvate carboxylase 2ProteinQ5GM68 (Uniprot-TrEMBL)
phosphoenolpyruvate carboxylase 3ProteinQ84VW9 (Uniprot-TrEMBL)
phosphoenolpyruvate carboxylase 4ProteinQ8GVE8 (Uniprot-TrEMBL)
phosphoglycerate kinaseProteinQ9SAJ4 (Uniprot-TrEMBL)
phosphoglycerate mutase 1ProteinO04499 (Uniprot-TrEMBL)
phosphoglycerate mutase 2ProteinQ9M9K1 (Uniprot-TrEMBL)
pyruvateMetabolite
pyruvate kinaseProteinQ9FFP6 (Uniprot-TrEMBL)
triose phosphate isomeraseProteinP48491 (Uniprot-TrEMBL)

Annotated Interactions

No annotated interactions

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