CMP-KDO Biosynthesis II (from D-arabinose 5-phosphate) (Arabidopsis thaliana)

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cytosol3-deoxy-D-manno-octulosonate8-PHomologues of2-dehydro-3-deoxyphosphooctonatealdolase(LOC_OS12G10784.1)PiPEPD-arabinose5-phosphateCMP-3-deoxy-D-manno-octulosonate3-deoxy-D-manno-octulosonateCTPPPiAT1G53000H2O


Description

This event has been computationally inferred from an event that has been demonstrated in another species.

The inference is based on Ensembl Compara orthology projection. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped ortholog or paralog are inferred to the other species. High-level events are also inferred for these events to allow for easier navigation.<p>Details of projection methods and parameters may be found <a href="/projection.html">here.</a><p>Original Pathway at Reactome: http://www.reactome.org/PathwayBrowser/#DB=gk_current&FOCUS_SPECIES_ID=48887&FOCUS_PATHWAY_ID=5402115</div>

Quality Tags

Ontology Terms

 

Bibliography

No bibliography


History

CompareRevisionActionTimeUserComment
82013view14:39, 8 September 2015Anweshafixing title, data source, & tagging incomplete pathways
80505view14:48, 25 June 2015AnweshaNew pathway

External references

DataNodes

View all...
NameTypeDatabase referenceComment
3-deoxy-D-manno-octulosonate 8-PMetaboliteCHEBI:18069 (ChEBI)
3-deoxy-D-manno-octulosonateMetaboliteCHEBI:32817 (ChEBI)
AT1G53000ProteinAT1G53000 (TAIR)
CMP-3-deoxy-D-manno-octulosonateMetaboliteCHEBI:18014 (ChEBI)
CTPMetaboliteCHEBI:17677 (ChEBI)
D-arabinose 5-phosphateMetaboliteCHEBI:16241 (ChEBI)
H2OMetaboliteCHEBI:15377 (ChEBI)
Homologues of

2-dehydro-3-deoxyphosphooctonate aldolase

(LOC_OS12G10784.1)
Protein5398938 (Reactome)
PEPMetaboliteCHEBI:18021 (ChEBI)
PPiMetaboliteCHEBI:29888 (ChEBI)
PiMetaboliteCHEBI:18367 (ChEBI)

Annotated Interactions

View all...
SourceTargetTypeDatabase referenceComment
3-deoxy-D-manno-octulosonate 8-PArrow5398940 (Reactome)
3-deoxy-D-manno-octulosonate5398678 (Reactome)
5398678 (Reactome) This event has been computationally inferred from an event that has been demonstrated in another species.

The inference is based on Ensembl Compara orthology projection. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped ortholog or paralog are inferred to the other species. High-level events are also inferred for these events to allow for easier navigation.

Details of projection methods and parameters may be found here.


5398940 (Reactome) This event has been computationally inferred from an event that has been demonstrated in another species.

The inference is based on Ensembl Compara orthology projection. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped ortholog or paralog are inferred to the other species. High-level events are also inferred for these events to allow for easier navigation.

Details of projection methods and parameters may be found here.


AT1G53000mim-catalysis5398678 (Reactome)
CMP-3-deoxy-D-manno-octulosonateArrow5398678 (Reactome)
CTP5398678 (Reactome)
D-arabinose 5-phosphate5398940 (Reactome)
H2O5398940 (Reactome)
Homologues of

2-dehydro-3-deoxyphosphooctonate aldolase

(LOC_OS12G10784.1)
mim-catalysis5398940 (Reactome)
PEP5398940 (Reactome)
PPiArrow5398678 (Reactome)
PiArrow5398940 (Reactome)

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