Chloroplastic Aminoacid Biosynthesis (Arabidopsis thaliana)

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alaninediaminopimelate decarboxylasecystathionine beta-lyasecystathionine gamma-lyasedihydroxy-acid dehydratasemeso-2,6-diaminopimelateO-acetyl-L-serineCO2serine acetyltransferaseadenosylhomocysteinaseSerinediaminopimelate epimeraseaspartate 4-decarboxylasebranched-chain-amino-acid transaminaseIsoleucine5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferaseS-sdenosylmethionineS-AdenosylhomocysteineHomocysteineCystathionineserine ammonia-lyasealanine dehydrogenase2,6-diaminopimelateDNADNA 5-methylcytosineacetolactate synthaselysineketol-acid reductoisomeraseaspartateCO2Valine2-aceto-2-hydroxybutanoateDNA (cytosine-5-)-methyltransferase2,3-dihydroxy-isovalerateCysteineS-adenosylmethionine synthasepyruvate2-Acetolactate2,3-dihydroxy-3-methylvalerate2-oxo-3-methylvalerate2-oxo-isovalerateValine and IsoleucineBiosynthesisMethionineO-phosphoserine sulfhydrylaseCysteine and MethionineBiosynthesisNAD+NADHLysineBiosynthesisGlycolysis


Description

No description

Quality Tags

Ontology Terms

 

Bibliography

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History

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CompareRevisionActionTimeUserComment
105899view11:36, 16 August 2019MkutmonHMDB identifier normalization
97781view13:52, 7 June 2018TeacupModified description
82872view16:29, 10 November 2015JmeliusCorrect outdated id
79787view15:55, 16 April 2015Mkutmonfixed unconnected line
78388view10:22, 7 January 2015MaintBotadded missing graphIds
76222view12:58, 18 June 2014AnweshaAdding missing reactome URL
76221view12:55, 18 June 2014AnweshaReverted to version '13:49, 19 May 2014' by Anwesha
76220view12:53, 18 June 2014ReactomeTeamAdding missing reactome URL
75329view13:49, 19 May 2014SbohlerAdded cell border and label for Chloroplast.
74131view05:24, 1 April 2014EgonwRemoved HMDB data sources where no ID was given.
73879view21:52, 26 February 2014MaintBotOntology Term : 'amino acid biosynthetic pathway' added !
73876view21:44, 26 February 2014MaintBotTried fixing odd scaling issue
73604view13:22, 4 February 2014AnweshaNew pathway

External references

DataNodes

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NameTypeDatabase referenceComment
2,3-dihydroxy-3-methylvalerateMetaboliteHMDB12140 (HMDB)
2,3-dihydroxy-isovalerateMetaboliteHMDB12141 (HMDB)
2,6-diaminopimelateMetabolite
2-AcetolactateMetaboliteHMDB06855 (HMDB)
2-aceto-2-hydroxybutanoateMetabolite
2-oxo-3-methylvalerateMetabolite
2-oxo-isovalerateMetabolite
5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferaseProteinO50008 (Uniprot-TrEMBL)
CO2Metabolite
CystathionineMetaboliteHMDB00099 (HMDB)
Cysteine and Methionine BiosynthesisPathway
CysteineMetaboliteHMDB00574 (HMDB)
DNAMetabolite
DNA (cytosine-5-)-methyltransferaseProtein2.1.1.37 (Enzyme Nomenclature)
DNA 5-methylcytosineMetabolite
GlycolysisPathway
HomocysteineMetaboliteHMDB00742 (HMDB)
IsoleucineMetaboliteHMDB00172 (HMDB)
Lysine BiosynthesisPathway
MethionineMetaboliteHMDB00696 (HMDB)
NAD+MetaboliteHMDB00902 (HMDB)
NADHMetaboliteHMDB01487 (HMDB)
O-acetyl-L-serineMetabolite
O-phosphoserine sulfhydrylaseProtein2.5.1.65 (Enzyme Nomenclature)
S-AdenosylhomocysteineMetaboliteHMDB00939 (HMDB)
S-adenosylmethionine synthaseProteinQ9SJL8 (Uniprot-TrEMBL)
S-sdenosylmethionineMetaboliteHMDB01185 (HMDB)
SerineMetaboliteHMDB00187 (HMDB)
Valine and Isoleucine BiosynthesisPathway
ValineMetaboliteHMDB00883 (HMDB)
acetolactate synthaseProtein2.2.1.6 (Enzyme Nomenclature)
adenosylhomocysteinaseProteinQ9LK36 (Uniprot-TrEMBL)
alanine dehydrogenaseProtein1.4.1.1 (Enzyme Nomenclature)
alanineMetaboliteHMDB00161 (HMDB)
aspartateMetabolite
aspartate 4-decarboxylaseProtein4.1.1.12 (Enzyme Nomenclature)
branched-chain-amino-acid transaminaseProtein2.6.1.42 (Enzyme Nomenclature)
cystathionine beta-lyaseProtein4.4.1.8 (Enzyme Nomenclature)
cystathionine gamma-lyaseProtein4.4.1.1 (Enzyme Nomenclature)
diaminopimelate decarboxylaseProtein4.1.1.20 (Enzyme Nomenclature)
diaminopimelate epimeraseProteinQ9LFG2 (Uniprot-TrEMBL)
dihydroxy-acid dehydrataseProtein4.2.1.9 (Enzyme Nomenclature)
ketol-acid reductoisomeraseProteinQ05758 (Uniprot-TrEMBL)
lysineMetaboliteHMDB00182 (HMDB)
meso-2,6-diaminopimelateMetabolite
pyruvateMetabolite
serine acetyltransferaseProtein2.3.1.30 (Enzyme Nomenclature)
serine ammonia-lyaseProtein4.3.1.17 (Enzyme Nomenclature)

Annotated Interactions

No annotated interactions

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