Calvin-Benson Cycle (Arabidopsis thaliana)

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ChloroplastH2CO3NADPHGlycolysisRuBisCO activase2-phosphoglycolateADPH+H2Oribulose 5-phosphate 3-epimerasecarbonic anhydrase 2carbonic anhydrase 1O2fructose-1,6-bisphosphatasePi3-phosphoglycerateerythrose 4-phosphateCO2fructose 6-phosphateATPsedoheptulose 1,7-bisphosphatefructose-1,6-bisphosphateribulose 5-phosphatesedoheptulose 1,7-bisphosphataseribose 5-phosphateribulose-1,5-bisphosphatesedoheptulose 7-phosphatexyluloase-5-phosphatephosphoribulokinaseCO2 + H2O1,3-bisphosphoglycerateNADP+fructose-1,6-bisphosphataseglyceraldahyde-3-phosphateDihydroxyacetone phosphatetriose phosphate isomeraseH2OH2OPifructose 1,6-bisphosphatealdolase 1fructose 6-phosphatePiH2Oaldolase 2Photorespiration2H+Starch MetabolismRuBisCO SSU1ARuBisCO LSURuBisCO SSU1BRuBisCO SSU2BRuBisCO SSU3Bphosphoglycerate kinase 2phosphoglycerate kinase 1glyceraldehyde-3-phosphate dehydrogenase 1glyceraldehyde-3-phosphate dehydrogenase 2aldolase 1aldolase 2transketolase 1transketolase 2aldolase 1aldolase 2transketolase 1transketolase 2ribulose 5-phosphate isomerase 3ribulose 5-phosphate isomerase 4


Description

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Quality Tags

Ontology Terms

 

Bibliography

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History

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CompareRevisionActionTimeUserComment
105898view11:36, 16 August 2019MkutmonHMDB identifier normalization
97813view14:31, 9 June 2018EgonwUndo revision 97771 by [[Special:Contributions/Youssefwalid|Youssefwalid]] ([[User talk:Youssefwalid|Talk]]) Text cannot be copied from other websites.
97771view13:34, 7 June 2018YoussefwalidModified description
78379view10:22, 7 January 2015MaintBotadded missing graphIds
76143view15:53, 11 June 2014SbohlerAll protein nodes are now annotated with Uniprot-TrEMBL IDs. Some nodes were split up into their different isoforms/subunits.
75326view13:38, 19 May 2014SbohlerAdded cell border and label for Chloroplast.
73916view09:45, 4 March 2014AnweshaAdded pathway identifiers
73915view09:42, 4 March 2014AnweshaAdded metabolite identifiers
73881view21:54, 26 February 2014MaintBotOntology Term : 'photosynthesis pathway' added !
73880view21:52, 26 February 2014MaintBotfixing scaling issue
73603view13:21, 4 February 2014AnweshaNew pathway

External references

DataNodes

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NameTypeDatabase referenceComment
1,3-bisphosphoglycerateMetabolite
2-phosphoglycolateMetabolite
2H+MetaboliteCHEBI:18276 (ChEBI)
3-phosphoglycerateMetaboliteC00197 (KEGG Compound)
ADPMetabolite
ATPMetaboliteHMDB00538 (HMDB)
CO2 + H2OMetabolite
CO2MetaboliteHMDB01967 (HMDB)
Dihydroxyacetone phosphateMetaboliteHMDB01473 (HMDB)
GlycolysisPathwayWP2621 (WikiPathways)
H+MetaboliteCHEBI:15378 (ChEBI)
H2CO3Metabolite
H2OMetaboliteHMDB02111 (HMDB)
NADP+MetaboliteHMDB00217 (HMDB)
NADPHMetaboliteHMDB00221 (HMDB)
O2Metabolite
PhotorespirationPathway
PiMetabolite
RuBisCO LSUProteinO03042 (Uniprot-TrEMBL)
RuBisCO SSU1AProteinP10795 (Uniprot-TrEMBL)
RuBisCO SSU1BProteinP10796 (Uniprot-TrEMBL)
RuBisCO SSU2BProteinP10797 (Uniprot-TrEMBL)
RuBisCO SSU3BProteinP10798 (Uniprot-TrEMBL)
RuBisCO activaseProteinP10896 (Uniprot-TrEMBL)
Starch MetabolismPathwayWP2622 (WikiPathways)
aldolase 1ProteinO65581 (Uniprot-TrEMBL)
aldolase 2ProteinQ944G9 (Uniprot-TrEMBL)
carbonic anhydrase 1ProteinP27140 (Uniprot-TrEMBL)
carbonic anhydrase 2ProteinP42737 (Uniprot-TrEMBL)
erythrose 4-phosphateMetaboliteHMDB01321 (HMDB)
fructose 1,6-bisphosphateMetaboliteHMDB01058 (HMDB)
fructose 6-phosphateMetaboliteHMDB00124 (HMDB)
fructose-1,6-bisphosphataseProteinP25851 (Uniprot-TrEMBL)
fructose-1,6-bisphosphateMetaboliteHMDB01058 (HMDB)
glyceraldahyde-3-phosphateMetabolite
glyceraldehyde-3-phosphate dehydrogenase 1ProteinP25856 (Uniprot-TrEMBL)
glyceraldehyde-3-phosphate dehydrogenase 2ProteinQ9LPW0 (Uniprot-TrEMBL)
phosphoglycerate kinase 1ProteinQ9LD57 (Uniprot-TrEMBL)
phosphoglycerate kinase 2ProteinP50318 (Uniprot-TrEMBL)
phosphoribulokinaseProteinP25697 (Uniprot-TrEMBL)
ribose 5-phosphateMetaboliteHMDB01548 (HMDB)
ribulose 5-phosphate 3-epimeraseProteinQ9SAU2 (Uniprot-TrEMBL)
ribulose 5-phosphate isomerase 3ProteinQ9S726 (Uniprot-TrEMBL)
ribulose 5-phosphate isomerase 4ProteinQ9FI13 (Uniprot-TrEMBL)
ribulose 5-phosphateMetaboliteHMDB00618 (HMDB)
ribulose-1,5-bisphosphateMetabolite
sedoheptulose 1,7-bisphosphataseProteinP46283 (Uniprot-TrEMBL)
sedoheptulose 1,7-bisphosphateMetabolite
sedoheptulose 7-phosphateMetaboliteHMDB01068 (HMDB)
transketolase 1ProteinQ8RWV0 (Uniprot-TrEMBL)
transketolase 2ProteinF4IW47 (Uniprot-TrEMBL)
triose phosphate isomeraseProteinQ9SKP6 (Uniprot-TrEMBL)
xyluloase-5-phosphateMetabolite

Annotated Interactions

No annotated interactions

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