Biotin metabolism (Mycobacterium tuberculosis)

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EC:3.4.-.-DethiobiotinbioF16-Carboxyhexanoyl-CoA3.5.1.12ec:6.3.4.10Holo-[carboxylase]BiotinLysine degredationec:6.3.4.118-Amino-7-oxononanoateTropane, piperidine and pyridine alkaloid biosynthesisec:6.3.4.15bioF2ec:6.3.4.9bioAec:6.3.4.9bioWec:6.2.1.11bioBec:6.3.4.11Biotynyl-5'-AMPBiotinyl-CoAec:6.3.4.10bioDN6-D-Biotinyl-L-lysineL-Lysineec:6.2.1.11ec:6.3.4.156-Carboxyhexanoatecpd:C01037Rv2223cpepQmycP1mycP2Rv2672Rv2224cRv3668c


Description

Quality Tags

Ontology Terms

 

Bibliography

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History

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CompareRevisionActionTimeUserComment
105017view08:36, 28 June 2019Fehrhartconnected lines
89513view10:45, 16 September 2016Mkutmonontology tag fix
78481view10:28, 7 January 2015MaintBotadded missing graphIds
72180view22:29, 25 October 2013AlexanderPicoadded corrected or missing xrefs
71557view19:29, 17 October 2013MaintBotAutomated update of data sources
69469view20:08, 8 July 2013MaintBotUpdated to 2013 gpml schema
67091view10:05, 26 June 2013Christine ChichesterOntology Term : 'biotin metabolic pathway' added !
41404view01:05, 2 March 2011MaintBotRemoved redundant pathway information and comments
38986view18:50, 25 September 2010AlexanderPicoModified categories
38985view18:49, 25 September 2010AlexanderPicoModified description
38984view18:49, 25 September 2010AlexanderPico
38983view18:48, 25 September 2010AlexanderPicoremoved redundant overlapping lines
38982view18:46, 25 September 2010AlexanderPicomanually added TubercuList to GPML; missing from database pulldown menu!
38981view18:44, 25 September 2010AlexanderPicofixed connections to groups
38763view23:05, 23 September 2010AllanKuchinskymo' cleanup of layout
38759view22:45, 23 September 2010AllanKuchinskycleanup layout
38733view21:27, 23 September 2010AllanKuchinskyclean up layout
38732view21:24, 23 September 2010AllanKuchinskyPeriodical save, work in progress
38730view21:14, 23 September 2010AllanKuchinskyPeriodical save, work in progress
38728view21:11, 23 September 2010AllanKuchinskystcking 6.3.4.- enzyme family
38726view21:04, 23 September 2010AllanKuchinskyPeriodical save, work in progress
38725view20:56, 23 September 2010AllanKuchinskySpecify description
38724view20:53, 23 September 2010AllanKuchinskyPeriodical save, work in progress
38723view19:44, 23 September 2010AlexanderPicoadded pathway nodes
38722view19:40, 23 September 2010AlexanderPicocleaned up demo of 3.4 group
38689view18:18, 23 September 2010AllanKuchinskyPeriodical save, work in progress
38686view18:07, 23 September 2010AllanKuchinskycleanup elbow
38684view17:57, 23 September 2010AlexanderPico
38683view17:54, 23 September 2010AllanKuchinskyelbow line
38681view17:48, 23 September 2010AllanKuchinskySpecify description
38679view17:36, 23 September 2010AllanKuchinskygrouping
38677view17:29, 23 September 2010AllanKuchinskygrouping 3.4.-- family
38631view21:14, 22 September 2010AllanKuchinskyPeriodical save, work in progress
38629view20:59, 22 September 2010AllanKuchinskyPeriodical save, work in progress
38518view17:39, 21 September 2010MaintBotNew pathway

External references

DataNodes

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NameTypeDatabase referenceComment
3.5.1.12GeneProductK01435 (Kegg ortholog)
6-CarboxyhexanoateMetaboliteC02656 (Kegg Compound)
6-Carboxyhexanoyl-CoAMetaboliteC01063 (Kegg Compound)
8-Amino-7-oxononanoateMetaboliteC01092 (Kegg Compound)
BiotinMetaboliteC00120 (Kegg Compound)
Biotinyl-CoAMetaboliteC01894 (Kegg Compound)
Biotynyl-5'-AMPMetaboliteC05921 (Kegg Compound)
DethiobiotinMetaboliteC01909 (Kegg Compound)
Holo-[carboxylase]MetaboliteC06250 (Kegg Compound)
L-LysineMetaboliteC00047 (Kegg Compound)
Lysine degredationPathwayWP1669 (WikiPathways)
N6-D-Biotinyl-L-lysineMetaboliteC05552 (Kegg Compound)
Rv2223cGeneProductRv2223c (TubercuList) Original kegg element: gene;25;mtu:Rv2223c mtu:Rv2224c mtu:Rv2535c mtu:Rv2672 mtu:Rv3668c mtu:Rv3883c mtu:Rv3886c
Rv2224cGeneProductRv2224c (TubercuList) Original kegg element: gene;25;mtu:Rv2223c mtu:Rv2224c mtu:Rv2535c mtu:Rv2672 mtu:Rv3668c mtu:Rv3883c mtu:Rv3886c
Rv2672GeneProductRv2672 (TubercuList) Original kegg element: gene;25;mtu:Rv2223c mtu:Rv2224c mtu:Rv2535c mtu:Rv2672 mtu:Rv3668c mtu:Rv3883c mtu:Rv3886c
Rv3668cGeneProductRv3668c (TubercuList) Original kegg element: gene;25;mtu:Rv2223c mtu:Rv2224c mtu:Rv2535c mtu:Rv2672 mtu:Rv3668c mtu:Rv3883c mtu:Rv3886c
Tropane, piperidine and pyridine alkaloid biosynthesisPathway
bioAGeneProductRv1568 (TubercuList) Original kegg element: gene;24;mtu:Rv1568
bioBGeneProductRv1589 (TubercuList) Original kegg element: gene;22;mtu:Rv1589
bioDGeneProductRv1570 (TubercuList) Original kegg element: gene;23;mtu:Rv1570
bioF1GeneProductRv1569 (TubercuList) Original kegg element: gene;26;mtu:Rv0032 mtu:Rv1569
bioF2GeneProductRv0032 (TubercuList) Original kegg element: gene;26;mtu:Rv0032 mtu:Rv1569
bioWGeneProductK01906 (Kegg ortholog)
cpd:C01037MetaboliteC01037 (Kegg Compound)
ec:6.2.1.11GeneProduct6.2.1.11 (Kegg enzyme)
ec:6.3.4.10GeneProductK01942 (Kegg ortholog)
ec:6.3.4.11GeneProductK01942 (Kegg ortholog)
ec:6.3.4.15GeneProductRv3279c (TubercuList) Original kegg element: gene;19;mtu:Rv3279c
ec:6.3.4.9GeneProductK01942
mycP1GeneProductRv3883c (TubercuList)
  • Original kegg element: gene;25;mtu:Rv2223c mtu:Rv2224c mtu:Rv2535c mtu:Rv2672 mtu:Rv3668c mtu:Rv3883c mtu:Rv3886c
  • Kyu, Madhu: note that these all correspond to the enzyme family 3.4.-.-
mycP2GeneProductRv3886c (TubercuList) Original kegg element: gene;25;mtu:Rv2223c mtu:Rv2224c mtu:Rv2535c mtu:Rv2672 mtu:Rv3668c mtu:Rv3883c mtu:Rv3886c
pepQGeneProductRv2535c (TubercuList) Original kegg element: gene;25;mtu:Rv2223c mtu:Rv2224c mtu:Rv2535c mtu:Rv2672 mtu:Rv3668c mtu:Rv3883c mtu:Rv3886c

Annotated Interactions

No annotated interactions

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