Endochondral Ossification (Mus musculus)

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1, 2Chondrocyte deathMineralisationChondrocyte proliferationCartilageVascular invastionWNT signalingcanonical / non-canonicalRemoval of extracellular matrixand invasion by bone cellsRemoval of cartilage matrixGs?Chondrocyte (pre)hypertrophyBMPsBoneDyingCathepsinsand CalpainsProliferationHypertrophyFull differentiationOsteoblasticdifferentiationintegrinsTNAPTgfb1Runx3Ift88PlatPthlhSlc38a2Mmp9Bmpr1aGli3Hdac4Fgfr1Stat1Timp3Serpinh1TriiodothyronineIhhTgfb1Cab39Bmp7PlauHmgcs1Ptch1Mmp13Col2a1Sox9Ddr2ScinFgf18Tgfb2Calm1Cst10Thyroid hormoneMef2cEnpp1Stat5bAdamts4GhrIgf2Col10a1ThraPtch1PrkacaSox6Growth hormoneAlplRunx2Chst11Runx2Sox5AcanRunx2Adamts1OxygenSpp1Adamts5Bmp6MgpCdkn1cThyroid hormoneFrzbIgf1rCtslNkx3-2Fgfr3Pth1rcAMPThraIgf1Kif3aPthVegfaFgf2Akt1


Description

No description

Comments

HomologyConvert 
This pathway was inferred from Homo sapiens pathway WP474(r29737) with a 94% conversion rate.

Quality Tags

Ontology Terms

 

Bibliography

  1. Belluoccio D, Bernardo BC, Rowley L, Bateman JF; ''A microarray approach for comparative expression profiling of the discrete maturation zones of mouse growth plate cartilage.''; Biochim Biophys Acta, 2008 PubMed Europe PMC Scholia
  2. Mackie EJ, Ahmed YA, Tatarczuch L, Chen KS, Mirams M; ''Endochondral ossification: how cartilage is converted into bone in the developing skeleton.''; Int J Biochem Cell Biol, 2008 PubMed Europe PMC Scholia

History

View all...
CompareRevisionActionTimeUserComment
114026view15:29, 17 December 2020Fehrhartconnected lines
107195view14:28, 17 September 2019MaintBotChEBI identifier normalization
106849view13:32, 17 September 2019MaintBotHMDB identifier normalization
87973view13:17, 25 July 2016SusanOntology Term : 'regulatory pathway' added !
72216view12:55, 27 October 2013EgonwFixed the ChEBI database name.
72176view22:19, 25 October 2013AlexanderPicoAdded missing metabolite identifiers.
69106view18:12, 8 July 2013MaintBotUpdated to 2013 gpml schema
41292view00:22, 2 March 2011MaintBotRemoved redundant pathway information and comments
32869view21:22, 16 September 2009MaintBotAdded xrefs
32298view13:15, 15 August 2009MaintBotFixed text labels
31870view12:38, 14 August 2009MaintBotFixed group labels
31327view20:20, 13 August 2009MaintBotFixed text labels
30897view00:23, 30 July 2009MaintBotNew pathway

External references

DataNodes

View all...
NameTypeDatabase referenceComment
AcanGeneProduct11595 (Entrez Gene)
Adamts1GeneProduct11504 (Entrez Gene)
Adamts4GeneProduct240913 (Entrez Gene)
Adamts5GeneProduct23794 (Entrez Gene)
Akt1GeneProduct11651 (Entrez Gene)
AlplGeneProduct11647 (Entrez Gene)
Bmp6GeneProduct12161 (Entrez Gene)
Bmp7GeneProduct12162 (Entrez Gene)
Bmpr1aGeneProduct12166 (Entrez Gene)
Cab39GeneProduct12283 (Entrez Gene)
Calm1GeneProduct12313 (Entrez Gene)
Cdkn1cGeneProduct12577 (Entrez Gene)
Chst11GeneProduct58250 (Entrez Gene)
Col10a1GeneProduct12813 (Entrez Gene)
Col2a1GeneProduct12824 (Entrez Gene)
Cst10GeneProduct58214 (Entrez Gene)
  • Taken as human homologue of mouse Cst10
  • PMID: 13679380
CtslGeneProduct13039 (Entrez Gene) Taken as homologue to mouse Cathepsin L (Ctsl)
Ddr2GeneProduct18214 (Entrez Gene)
Enpp1GeneProduct18605 (Entrez Gene)
Fgf18GeneProduct14172 (Entrez Gene)
Fgf2GeneProduct14173 (Entrez Gene)
Fgfr1GeneProduct14182 (Entrez Gene)
Fgfr3GeneProduct14184 (Entrez Gene)
FrzbGeneProduct20378 (Entrez Gene)
GhrGeneProduct14600 (Entrez Gene)
Gli3GeneProduct14634 (Entrez Gene)
Growth hormoneGeneProduct
Hdac4GeneProduct208727 (Entrez Gene)
Hmgcs1GeneProduct208715 (Entrez Gene)
Ift88GeneProduct21821 (Entrez Gene)
Igf1GeneProduct16000 (Entrez Gene)
Igf1rGeneProduct16001 (Entrez Gene)
Igf2GeneProduct16002 (Entrez Gene)
IhhGeneProduct16147 (Entrez Gene)
Kif3aGeneProduct16568 (Entrez Gene)
Mef2cGeneProduct17260 (Entrez Gene)
MgpGeneProduct17313 (Entrez Gene)
Mmp13GeneProduct17386 (Entrez Gene)
Mmp9GeneProduct17395 (Entrez Gene)
Nkx3-2GeneProduct12020 (Entrez Gene)
OxygenMetaboliteHMDB01377 (HMDB)
PlatGeneProduct18791 (Entrez Gene)
PlauGeneProduct18792 (Entrez Gene)
PrkacaGeneProduct18747 (Entrez Gene)
Ptch1GeneProduct19206 (Entrez Gene)
PthGeneProduct19226 (Entrez Gene)
Pth1rGeneProduct19228 (Entrez Gene)
PthlhGeneProduct19227 (Entrez Gene)
Runx2GeneProduct12393 (Entrez Gene)
Runx3GeneProduct12399 (Entrez Gene)
ScinGeneProduct20259 (Entrez Gene) PMID: 17097081
Serpinh1GeneProduct12406 (Entrez Gene)
Slc38a2GeneProduct67760 (Entrez Gene)
Sox5GeneProduct20678 (Entrez Gene)
Sox6GeneProduct20679 (Entrez Gene)
Sox9GeneProduct20682 (Entrez Gene)
Spp1GeneProduct20750 (Entrez Gene)
Stat1GeneProduct20846 (Entrez Gene)
Stat5bGeneProduct20851 (Entrez Gene)
TNAPGeneProduct
Tgfb1GeneProduct21803 (Entrez Gene)
Tgfb2GeneProduct21808 (Entrez Gene)
ThraGeneProduct21833 (Entrez Gene)
Thyroid hormoneMetabolite60311 (ChEBI)
Thyroid hormoneMetaboliteT4
Timp3GeneProduct21859 (Entrez Gene)
TriiodothyronineMetabolite24864 (ChEBI)
VegfaGeneProduct22339 (Entrez Gene)
cAMPMetaboliteHMDB00058 (HMDB)

Annotated Interactions

No annotated interactions
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