Monoterpene Biosynthesis Pathway Genes in Mint (Vitis vinifera)

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(+)-cis-IsopulegoneMFS(+)-MenthofuranISPD(+)-Isomenthone(+)-NeomentholPRISPR(-)-MenthoneGeranyl diphosphate(-)-Menthol(-)-trans-Isopiperitenol(-)-Limonene(-)-trans-CarveolMMR 1(+)-IsomentholLSISPIL6HL3HCDH(+)-PulegoneMNR 1(-)-Carvone(+)-Neoisomenthol11MMR 211111111111MNR 21


Description

No description

Quality Tags

Ontology Terms

 

Bibliography

  1. Croteau RB, Davis EM, Ringer KL, Wildung MR; ''(-)-Menthol biosynthesis and molecular genetics.''; Naturwissenschaften, 2005 PubMed Europe PMC

History

CompareRevisionActionTimeUserComment
106609view12:24, 11 September 2019Marvin M2Ontology Term : 'monoterpene biosynthetic pathway' added !
106605view20:34, 10 September 2019VAishwaryaModified title
106604view20:34, 10 September 2019VAishwaryaNew pathway

External references

DataNodes

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NameTypeDatabase referenceComment
(+)-IsomentholMetabolite
(+)-IsomenthoneMetaboliteC11952 (KEGG Compound)
(+)-MenthofuranMetaboliteC18025 (KEGG Compound)
(+)-NeoisomentholMetabolite
(+)-NeomentholMetaboliteC00553 (KEGG Compound)
(+)-PulegoneMetaboliteC09893 (KEGG Compound)
(+)-cis-IsopulegoneMetaboliteC11951 (KEGG Compound)
(-)-CarvoneMetaboliteC01767 (KEGG Compound)
(-)-LimoneneMetaboliteC00521 (KEGG Compound)
(-)-MentholMetaboliteC00400 (KEGG Compound)
(-)-MenthoneMetaboliteC00843 (KEGG Compound)
(-)-trans-CarveolMetaboliteC00964 (KEGG Compound)
(-)-trans-IsopiperitenolMetaboliteC01123 (KEGG Compound)
CDHProteinABR15424.1 (NCBI Protein) (-)-trans-carveol dehydrogenase https://www.ncbi.nlm.nih.gov/protein/148887811
Geranyl diphosphateMetaboliteC00341 (KEGG Compound)
ISPDProtein(-)-Isopiperitenol / (-)-carveol dehydrogenase

---------ISPD-1------------ M. longifolia Chromosome: 2 Location Identifier: Mlong585_04858 Number of Introns: 0 Expression Level in Glandular Trichomes[TPM]: 137 Homology to Canonical Genes: 98 %identity to Q5C9I9 ---------ISPD-2------------ M. longifolia Chromosome: 2 Location Identifier: Mlong585_04874 Number of Introns: 0 Expression Level in Glandular Trichomes[TPM]: 137 Homology to Canonical Genes: 98 %identity to Q5C9I9 ---------ISPD-L1------------ M. longifolia Chromosome: 2 Location Identifier: Mlong585_04859 Number of Introns: 0 Expression Level in Glandular Trichomes[TPM]: 127 Homology to Canonical Genes: 72 % identity to Q5C9I9 ---------ISPD-L2------------ M. longifolia Chromosome: 2 Location Identifier: Mlong585_04873 Number of Introns: 0 Expression Level in Glandular Trichomes[TPM]: 127

Homology to Canonical Genes: 72 % identity to Q5C9I9
ISPIProtein(+)-cis-isopulegone isomerase
ISPRProteinAAQ75422.1 (NCBI Protein) (-)-trans-isopipertenone reductase

(-)-Isopiperitenone reductase https://www.ncbi.nlm.nih.gov/protein/34559416 ---------ISPR-1------------ M. longifolia Chromosome: 11 Location Identifier: Mlong585_36604 Number of Introns: 4 Expression Level in Glandular Trichomes[TPM]: 20 Homology to Canonical Genes: 94 % identity to Q6WAU1 ---------ISPR-2------------ M. longifolia Chromosome: 11 Location Identifier: Mlong585_36605 Number of Introns: 4 Expression Level in Glandular Trichomes[TPM]: 20

Homology to Canonical Genes: 99 % identity to Q6WAU1
L3HProteinAIS36971.1 (NCBI Protein) (-)-Limonene 3-hydroxylase

https://www.ncbi.nlm.nih.gov/protein/693445895 ---------L3H-1------------ M. longifolia Chromosome: 5 Location Identifier: Mlong585_17637 Number of Introns: 1 Expression Level in Glandular Trichomes[TPM]: 2281 Homology to Canonical Genes: 99 % identity to Q9XHE7 ---------L3H-2------------ M. longifolia Chromosome: 5 Location Identifier: Mlong585_17629 Number of Introns: 1 Expression Level in Glandular Trichomes[TPM]: 2281 Homology to Canonical Genes: 99 % identity to Q9XHE7 ---------L3H-3------------ M. longifolia Chromosome: 9 Location Identifier: Mlong585_30867 Number of Introns: 1 Expression Level in Glandular Trichomes[TPM]: 2475 Homology to Canonical Genes: 97 % identity to Q9XHE7 ---------L3H-4------------ M. longifolia Chromosome: 9 Location Identifier: Mlong585_30867 Number of Introns: 1 Expression Level in Glandular Trichomes[TPM]: 2475

Homology to Canonical Genes: 97 % identity to Q9XHE7
L6HProteinAAT39473.1 (NCBI Protein) (-)-limonene 6-hydroxylase https://www.ncbi.nlm.nih.gov/protein/47933782
LSProteinAGN90912.1 (NCBI Protein) (-)-Limonene Synthase

https://www.ncbi.nlm.nih.gov/protein/511636128 ---------LS-1------------ M. longifolia Chromosome: 5 Location Identifier: Mlong585_17628 Number of Introns: 6 Expression Level in Glandular Trichomes[TPM]: 5246 Homology to Canonical Genes: 98% identity to Q40322 ---------LS-2------------ M. longifolia Chromosome: 5 Location Identifier: Mlong585_17636 Number of Introns: 6 Expression Level in Glandular Trichomes[TPM]: 5246

Homology to Canonical Genes: 98% identity to Q40322
MFSProteinABW86890.1 (NCBI Protein) (+)-menthofuran synthase

https://www.ncbi.nlm.nih.gov/protein/158979036 ---------MFS-L1------------ M. longifolia Chromosome: 2 Location Identifier: Mlong585_05231 Number of Introns: 2 Expression Level in Glandular Trichomes[TPM]: 1180

Homology to Canonical Genes: 90 % identity to Q947B7
MMR 1ProteinANA95861.1 (NCBI Protein) (-)-methone:(-)-menthol reductase

https://www.ncbi.nlm.nih.gov/protein/1023043139 ---------MMR-L1------------ M. longifolia Chromosome: 11 Location Identifier: Mlong585_36607 Number of Introns: 6 Expression Level in Glandular Trichomes[TPM]: 107 Homology to Canonical Genes: 87 %identity to Q9XHE7

MMR 2ProteinANA95861.1 (NCBI Protein) (-)-methone:(-)-menthol reductase

https://www.ncbi.nlm.nih.gov/protein/1023043139 ---------MMR-L1------------ M. longifolia Chromosome: 11 Location Identifier: Mlong585_36607 Number of Introns: 6 Expression Level in Glandular Trichomes[TPM]: 107

Homology to Canonical Genes: 87 %identity to Q9XHE7
MNR 1ProteinAAQ55959.1 (NCBI Protein) (-)-Menthone:(+)-isomenthol reductase-like

https://www.ncbi.nlm.nih.gov/protein/33950276 ---------MNR-L1------------ M. longifolia Chromosome: 11 Location Identifier: Mlong585_36608 Number of Introns: 0 Expression Level in Glandular Trichomes[TPM]: n/a

Homology to Canonical Genes: pseudogene (premature stop codon)
MNR 2ProteinAAQ55959.1 (NCBI Protein) (-)-Menthone:(+)-isomenthol reductase-like

https://www.ncbi.nlm.nih.gov/protein/33950276 ---------MNR-L1------------ M. longifolia Chromosome: 11 Location Identifier: Mlong585_36608 Number of Introns: 0 Expression Level in Glandular Trichomes[TPM]: n/a

Homology to Canonical Genes: pseudogene (premature stop codon
PRProteinAAQ75423.1 (NCBI Protein) (+)-pulegone reductase

https://www.ncbi.nlm.nih.gov/protein/34559418 ---------PulR-1------------ M. longifolia Chromosome: 3 Location Identifier: Mlong585_09229 Number of Introns: 4 Expression Level in Glandular Trichomes[TPM]: 3116 Homology to Canonical Genes: 95 % identity to Q6WAU0 ---------PulR-2------------ M. longifolia Chromosome: 3 Location Identifier: Mlong585_09276 Number of Introns: 4 Expression Level in Glandular Trichomes[TPM]: 3116 Homology to Canonical Genes: 95 % identity to Q6WAU0 Mlong585_09276 ---------PulR-3------------ M. longifolia Chromosome: 3 Location Identifier: Mlong585_09230 Number of Introns: 0 Expression Level in Glandular Trichomes[TPM]: n/a Homology to Canonical Genes: pseudogene (premature stop codon) ---------PulR-L1------------ M. longifolia Chromosome: 2 Location Identifier: Mlong585_06346 Number of Introns: 4 Expression Level in Glandular Trichomes[TPM]: 153 Homology to Canonical Genes: 92 % identity to Q6WAU0

Annotated Interactions

No annotated interactions

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