ncRNAs involved in Wnt signaling in hepatocellular carcinoma (Homo sapiens)

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Scaffold1, 3222222NucleusFrizzled LigandsTranscriptional ActivationCancer stem cellEpithelial-mesenchymal transitionWNT4FZD3MIR214MIR452lnc-beta-catmlncTCF7WNT5AMYCWNT11CTNNB1APCFOSL1ELAVL1LEF1DVL2WNT626S Proteasome DegradationCCND1FZD9FZD1WNT2DVL3JUNWNT3CSNK2A1ROR1WNT3AWNT10ACSNK1ECHD8lncRNA-LALR1CSNK2A3EZH2DANCRWNT7BTCF7L1FZD6CCND2KREM1AXIN1MIR1247WNT2BSOX7CSNK1A1TCF7PLAUFRAT1CSNK2BFZD2UFC1WNT16GSK3BFZD8WNT1DVL1WNT5BLRP6FZD4CSNK2A2LRP5HBX-LINE1FZD5WNT10BRYKFZD10WNT16TCF7L2CCND3CSNK1A1LFZD7WNT7APPPROR2PCTNNB1PPCTNNB1PUbDKK1DKK2DKK4SOSTSERPINF1FRAT2CTNNB1SFRP1SFRP2SFRP4SFRP5NOTUMCER1WIF1PORCNNKD1NKD2CXXC4SENP2NLKPCTNNBIP1SOX17CTBP1CTBP2MIR15BMIR195MTDHMIR18AKLF4MIR320A


Description

This pathway is based on the Wnt Signaling Pathway with information on lncRNA involvement in hepatocellular carcinoma from Fig 3 in Klingenberg et al.

Quality Tags

Ontology Terms

 

Bibliography

  1. Nusse R; ''Wnt signaling in disease and in development.''; Cell Res, 2005 PubMed Europe PMC Scholia
  2. Vasuri F, Visani M, Acquaviva G, Brand T, Fiorentino M, Pession A, Tallini G, D'Errico A, de Biase D; ''Role of microRNAs in the main molecular pathways of hepatocellular carcinoma.''; World J Gastroenterol, 2018 PubMed Europe PMC Scholia
  3. Klingenberg M, Matsuda A, Diederichs S, Patel T; ''Non-coding RNA in hepatocellular carcinoma: Mechanisms, biomarkers and therapeutic targets.''; J Hepatol, 2017 PubMed Europe PMC Scholia

History

View all...
CompareRevisionActionTimeUserComment
108198view10:58, 29 November 2019FehrhartOntology Term : 'cancer pathway' added !
108197view10:58, 29 November 2019FehrhartOntology Term : 'hepatocyte' added !
105488view05:44, 8 August 2019KhanspersModified description
105472view05:19, 8 August 2019KhanspersModified description
103459view23:59, 4 March 2019KhanspersAdded miRNA regulation from Vasuri et al
98467view19:13, 7 September 2018KhanspersModified description
98462view18:04, 7 September 2018KhanspersModified title
98461view18:01, 7 September 2018KhanspersModified description
98460view18:01, 7 September 2018KhanspersOntology Term : 'hepatocellular carcinoma' added !
98459view18:00, 7 September 2018KhanspersOntology Term : 'altered Wnt signaling pathway' added !
98458view18:00, 7 September 2018KhanspersModified description
98457view17:54, 7 September 2018Khanspersadded lit ref
98456view17:53, 7 September 2018KhanspersNew pathway

External references

DataNodes

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NameTypeDatabase referenceComment
26S Proteasome DegradationPathwayWP183 (WikiPathways)
APCGeneProduct324 (Entrez Gene)
AXIN1GeneProduct8312 (Entrez Gene)
CCND1GeneProduct595 (Entrez Gene)
CCND2GeneProduct894 (Entrez Gene)
CCND3GeneProduct896 (Entrez Gene)
CER1GeneProductENSG00000147869 (Ensembl)
CHD8GeneProductENSG00000100888 (Ensembl)
CSNK1A1GeneProductENSG00000113712 (Ensembl)
CSNK1A1LGeneProductENSG00000180138 (Ensembl)
CSNK1EGeneProduct1454 (Entrez Gene)
CSNK2A1GeneProductENSG00000101266 (Ensembl)
CSNK2A2GeneProductENSG00000070770 (Ensembl)
CSNK2A3GeneProductENSG00000254598 (Ensembl)
CSNK2BGeneProductENSG00000204435 (Ensembl)
CTBP1GeneProductENSG00000159692 (Ensembl)
CTBP2GeneProductENSG00000175029 (Ensembl)
CTNNB1GeneProduct1499 (Entrez Gene)
CTNNBIP1GeneProductENSG00000178585 (Ensembl)
CXXC4GeneProductENSG00000168772 (Ensembl)
DANCRRnaENSG00000226950 (Ensembl)
DKK1GeneProductENSG00000107984 (Ensembl)
DKK2GeneProductENSG00000155011 (Ensembl)
DKK4GeneProductENSG00000104371 (Ensembl)
DVL1GeneProduct1855 (Entrez Gene)
DVL2GeneProduct1856 (Entrez Gene)
DVL3GeneProduct1857 (Entrez Gene)
ELAVL1GeneProductENSG00000066044 (Ensembl)
EZH2GeneProductENSG00000106462 (Ensembl)
FOSL1GeneProduct8061 (Entrez Gene)
FRAT1GeneProduct10023 (Entrez Gene)
FRAT2GeneProductENSG00000181274 (Ensembl)
FZD10GeneProduct11211 (Entrez Gene)
FZD1GeneProduct8321 (Entrez Gene)
FZD2GeneProduct2535 (Entrez Gene)
FZD3GeneProduct7976 (Entrez Gene)
FZD4GeneProduct6424 (Entrez Gene)
FZD5GeneProduct7855 (Entrez Gene)
FZD6GeneProduct8323 (Entrez Gene)
FZD7GeneProduct8324 (Entrez Gene)
FZD8GeneProduct8325 (Entrez Gene)
FZD9GeneProduct8326 (Entrez Gene)
GSK3BGeneProduct2932 (Entrez Gene) MOUSE:KG38 MOUSE
HBX-LINE1GeneProduct
JUNGeneProduct3725 (Entrez Gene)
KLF4GeneProductENSG00000136826 (Ensembl)
KREM1GeneProduct83999 (Entrez Gene)
LEF1GeneProductENSG00000138795 (Ensembl)
LRP5GeneProduct4041 (Entrez Gene)
LRP6GeneProduct4040 (Entrez Gene)
MIR1247GeneProductMIMAT0005899 (miRBase mature sequence)
MIR15BGeneProductMIMAT0000417 (miRBase mature sequence)
MIR18AGeneProductENSG00000283815 (Ensembl)
MIR195GeneProductMIMAT0000461 (miRBase mature sequence)
MIR214GeneProductMIR214 (HGNC)
MIR320AGeneProductENSG00000208037 (Ensembl)
MIR452GeneProductENSG00000283751 (Ensembl)
MTDHGeneProductENSG00000147649 (Ensembl)
MYCGeneProduct4609 (Entrez Gene)
NKD1GeneProductENSG00000140807 (Ensembl)
NKD2GeneProductENSG00000145506 (Ensembl)
NLKGeneProductENSG00000087095 (Ensembl)
NOTUMGeneProductENSG00000185269 (Ensembl)
PLAUGeneProduct5328 (Entrez Gene)
PORCNGeneProductENSG00000102312 (Ensembl)
ROR1GeneProduct4919 (Entrez Gene)
ROR2GeneProduct4920 (Entrez Gene)
RYKGeneProduct6259 (Entrez Gene)
SENP2GeneProductENSG00000163904 (Ensembl)
SERPINF1GeneProductENSG00000132386 (Ensembl)
SFRP1GeneProductENSG00000104332 (Ensembl)
SFRP2GeneProductENSG00000145423 (Ensembl)
SFRP4GeneProductENSG00000106483 (Ensembl)
SFRP5GeneProductENSG00000120057 (Ensembl)
SOSTGeneProductENSG00000167941 (Ensembl)
SOX17GeneProductENSG00000164736 (Ensembl)
SOX7GeneProductENSG00000171056 (Ensembl)
TCF7GeneProductENSG00000081059 (Ensembl)
TCF7L1GeneProductENSG00000152284 (Ensembl)
TCF7L2GeneProductENSG00000148737 (Ensembl)
UFC1Rna
WIF1GeneProductENSG00000156076 (Ensembl)
WNT10AGeneProduct80326 (Entrez Gene)
WNT10BGeneProduct7480 (Entrez Gene)
WNT11GeneProduct7481 (Entrez Gene)
WNT16GeneProduct51384 (Entrez Gene)
WNT1GeneProduct7471 (Entrez Gene)
WNT2GeneProduct7472 (Entrez Gene)
WNT2BGeneProduct7482 (Entrez Gene)
WNT3GeneProduct7473 (Entrez Gene)
WNT3AGeneProduct89780 (Entrez Gene)
WNT4GeneProduct54361 (Entrez Gene)
WNT5AGeneProduct7474 (Entrez Gene)
WNT5BGeneProduct81029 (Entrez Gene)
WNT6GeneProduct7475 (Entrez Gene)
WNT7AGeneProduct7476 (Entrez Gene)
WNT7BGeneProduct7477 (Entrez Gene)
lnc-beta-catmRna
lncRNA-LALR1Rna
lncTCF7Rna

Annotated Interactions

No annotated interactions

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