Sandbox Pathway Test (Homo sapiens)

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162NucleusCalciumMIR338BRCA2Substrate éBRCA1MMPéTCA CycleD-GlucoseADPAKAP2TP53Mitochondria4P3, 5BRCA1Alpha-D-GlucoseATP


This is just one test pathway with a variety of object types including datanodes which can be annotated with database entries. Feel free to edit anything on this page.

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Ontology Terms



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  1. Pico AR, Kelder T, van Iersel MP, Hanspers K, Conklin BR, Evelo C; ''WikiPathways: pathway editing for the people.''; PLoS Biol, 2008 PubMed Europe PMC Scholia
  2. Kelder T, van Iersel MP, Hanspers K, Kutmon M, Conklin BR, Evelo CT, Pico AR; ''WikiPathways: building research communities on biological pathways.''; Nucleic Acids Res, 2012 PubMed Europe PMC Scholia
  3. Talépéoo; ''Test''; Test, 2018
  4. Kelder T, Conklin BR, Evelo CT, Pico AR; ''Finding the right questions: exploratory pathway analysis to enhance biological discovery in large datasets.''; PLoS Biol, 2010 PubMed Europe PMC Scholia
  5. MMP2è; ''Test''; Test, 2018
  6. Kelder T, Pico AR, Hanspers K, van Iersel MP, Evelo C, Conklin BR; ''Mining biological pathways using WikiPathways web services.''; PLoS One, 2009 PubMed Europe PMC Scholia


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111234view03:51, 27 July 2020Khansperstesting
111233view03:50, 27 July 2020KhanspersModified description
111151view20:36, 20 July 2020Khansperstest
110830view12:03, 11 June 2020MkutmonModified description
108828view21:54, 31 January 2020KhanspersReverted to version '21:53, 31 January 2020' by Khanspers
108827view21:54, 31 January 2020KhanspersModified description
108826view21:53, 31 January 2020KhanspersModified description
108238view21:02, 1 December 2019AdminTesterModified description
107922view18:50, 11 November 2019KhanspersModified title
107397view18:50, 4 October 2019Khansperstesting
107346view19:25, 26 September 2019Khansperstest
107325view17:44, 23 September 2019AlexanderPicocleaning sandbox
106342view09:06, 21 August 2019DeSlAnnotated lit ref with "query pubmed" function.
106341view09:04, 21 August 2019DeSlTrying to create empty references (again)
106340view09:00, 21 August 2019DeSlRemoved nodes with same lit. ref.
106339view08:59, 21 August 2019DeSlAdded same lit. ref.
106338view08:58, 21 August 2019DeSlTrying to recreate empty publication being added to website (and GPML).
105284view17:46, 26 July 2019Khanspersminor update
104916view20:17, 24 June 2019Ariuttamake a simple example
104915view20:16, 24 June 2019Ariuttamake a complex
103992view15:18, 24 April 2019DeSlAdded reverse reaction template
103991view13:37, 24 April 2019DeSlWant to see diff between modification, conversion and binding MIM.
103990view13:34, 24 April 2019DeSlAdded phosphorylation template
103947view13:27, 17 April 2019DeSlRemoved licence + last modified info
103946view13:26, 17 April 2019DeSlTesting mim-translocation
103942view21:55, 16 April 2019AlexanderPicotest edit
102378view13:52, 21 December 2018Mkutmontest
102377view13:51, 21 December 2018Mkutmontest
102369view11:51, 21 December 2018Mkutmontest
102368view11:49, 21 December 2018Mkutmontest
102367view11:47, 21 December 2018Mkutmontest
102366view11:46, 21 December 2018Mkutmontest
102365view11:45, 21 December 2018Mkutmontest characters
102364view11:44, 21 December 2018Mkutmontest
101724view21:21, 1 November 2018Khansperstest
98040view09:16, 6 July 2018MkutmonTest
97140view22:34, 30 April 2018Khansperstest
96903view18:45, 18 April 2018AlexanderPicoReverted to version '12:07, 13 March 2018' by AlexanderPico
96833view03:05, 11 April 2018Artoria2e5Modified description
96829view00:52, 11 April 2018Artoria2e5Modified description
96828view00:48, 11 April 2018Artoria2e5Modified description
96827view00:47, 11 April 2018Artoria2e5Modified description
96826view00:44, 11 April 2018Artoria2e5Modified description
96427view19:07, 13 March 2018AlexanderPicofixed xrefs
96426view19:06, 13 March 2018AlexanderPicoReverted to version '14:59, 24 April 2017' by AlexanderPico
96425view19:05, 13 March 2018AlexanderPicoReverted to version '17:26, 15 December 2017' by AlexanderPico
96243view06:58, 2 March 2018KhanspersModified description
96242view06:58, 2 March 2018KhanspersReverted to version '06:58, 2 March 2018' by Khanspers
96241view06:58, 2 March 2018KhanspersModified description
96240view06:58, 2 March 2018KhanspersModified description

External references


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NameTypeDatabase referenceComment
ADPMetaboliteHMDB01508 (HMDB)
AKAP2GeneProduct11217 (Entrez Gene)
BRCA1GeneProductENSG00000012048 (Ensembl)
BRCA2GeneProductENSG00000139618 (Ensembl)
CalciumMetaboliteHMDB00464 (HMDB) At least xx needed.
MIR338RnaENSG00000211563 (Ensembl)
MMPéGeneProductENSG00000087245 (Ensembl)
Substrate éMetaboliteundefined (Ensembl Plants)
TCA CyclePathwayWP78 (WikiPathways)
TP53GeneProductENSG00000141510 (Ensembl)

Annotated Interactions

SourceTargetTypeDatabase referenceComment
BRCA1mim-conversion10003 (Rhea)
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