TCA Cycle (Danio rerio)

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GlycolysisGluconeogenesisMitochondrionCytosolFatty Acid SynthesisElectron Transport ChainDegradation of Fatty AcidsContaining an Even Number of CarbonsDegradation of Fatty AcidsContaining an Odd Number of CarbonsFumaratedldhOGDHL-malateIDH2OxaloacetateL-malatecsSUCLG2aco2zgc:86647PDK3bSUCLG1idh3aAcetyl-CoAdldhdlatPCMDH1aaPDK2alpha-ketoglutarateSDHASDHDadlstcaffeine citratePDK1OxaloacetatesuccinatepdhbPDHA2pyruvateMDH2SDHBPDHXPDK4PDP2zgc:112190succinyl-CoAsucla2isocitrateFHPDHA1ASDHCSDHDbMDH1abMDH1bPDHA1Bidh3b


Description

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Quality Tags

Ontology Terms

 

Bibliography

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History

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CompareRevisionActionTimeUserComment
96499view06:47, 16 March 2018EgonwReplaced a secondary ChEBI identifier with a primary identifier.
96474view15:57, 15 March 2018SusanAnnotated metabolites
96468view15:48, 15 March 2018SusanConnected lines
91937view10:56, 6 April 2017LWackersAdded alpha and beta subunits of some genes, added annotations.
77409view22:42, 5 September 2014MaintBotremoved homology mapp label
71527view19:22, 17 October 2013MaintBotAutomated update of data sources
68660view05:17, 6 July 2013MaintBotUpdated to 2013 gpml schema
67684view11:49, 26 June 2013DdiglesOntology Term : 'citrate cycle pathway' added !
53545view21:19, 8 November 2012EgonwReplaced multiple general nodes by Metabolite DataNode's.
40831view22:18, 1 March 2011MaintBotRemoved redundant pathway information and comments
34217view21:33, 9 December 2009MaintBotAutomatic update of empty xrefs
20715view11:29, 14 November 2008MaintBot[[Pathway:Danio rerio:Krebs-TCA Cycle]] moved to [[Pathway:WP19]]: Moved to stable identifier
12044view08:45, 15 May 2008MaintBotAdded to category $category
19499view08:45, 15 May 2008N.FidelmanUploaded new pathway
12042view08:45, 15 May 2008KdahlquistUploaded new pathway

External references

DataNodes

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NameTypeDatabase referenceComment
Acetyl-CoAMetaboliteCHEBI:15351 (ChEBI)
FHGeneProduct393938 (Entrez Gene)
FumarateMetaboliteCHEBI:18012 (ChEBI)
IDH2GeneProduct386951 (Entrez Gene)
L-malateMetaboliteCHEBI:15589 (ChEBI)
MDH1aaGeneProductENSDARG00000017772 (Ensembl)
MDH1abGeneProductENSDARG00000103849 (Ensembl)
MDH1bGeneProductENSDARG00000018008 (Ensembl)
MDH2GeneProduct406405 (Entrez Gene)
OGDHGeneProduct564552 (Entrez Gene)
OxaloacetateMetaboliteCHEBI:30744 (ChEBI)
PCGeneProduct58068 (Entrez Gene)
PDHA1AGeneProduct406702 (Entrez Gene)
PDHA1BGeneProductENSDARG00000010555 (Ensembl)
PDHA2GeneProduct
PDHXGeneProductENSDARG00000051756 (Ensembl)
PDK1GeneProductENSDARG00000013128 (Ensembl)
PDK2GeneProduct393971 (Entrez Gene)
PDK3bGeneProductENSDARG00000099791 (Ensembl)
PDK4GeneProductENSDARG00000054848 (Ensembl)
PDP2GeneProduct58149 (Entrez Gene)
SDHAGeneProduct393884 (Entrez Gene)
SDHBGeneProduct562149 (Entrez Gene)
SDHCGeneProductENSDARG00000038608 (Ensembl)
SDHDaGeneProductENSDARG00000055712 (Ensembl)
SDHDbGeneProductENSDARG00000030139 (Ensembl)
SUCLG1GeneProduct436850 (Entrez Gene)
SUCLG2GeneProduct317746 (Entrez Gene)
aco2GeneProduct322670 (Entrez Gene)
alpha-ketoglutarateMetaboliteCHEBI:16810 (ChEBI)
caffeine citrateMetaboliteCHEBI:27732 (ChEBI)
csGeneProduct322339 (Entrez Gene)
dlatGeneProduct324201 (Entrez Gene)
dldhGeneProduct399479 (Entrez Gene)
dlstGeneProduct368262 (Entrez Gene)
idh3aGeneProduct393926 (Entrez Gene)
idh3bGeneProductENSDARG00000044753 (Ensembl)
isocitrateMetaboliteCHEBI:16087 (ChEBI)
pdhbGeneProduct406428 (Entrez Gene)
pyruvateMetaboliteCHEBI:15361 (ChEBI)
succinateMetaboliteCHEBI:30031 (ChEBI)
succinyl-CoAMetaboliteCHEBI:15380 (ChEBI)
sucla2GeneProduct406299 (Entrez Gene)
zgc:112190GeneProduct550408 (Entrez Gene)
zgc:86647GeneProduct415247 (Entrez Gene)

Annotated Interactions

No annotated interactions

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