Cerebral organic acidurias, including diseases (WP4519)
Homo sapiens
This pathway shows disorders related to the accumulation of organic acids in body fluids, resulting in cerebral organic acidurias. Symptoms often include mental or motor retardation, difficulties while moving and epilepsy. For all but one disorder, current treatment options have been proven ineffective. Disorders resulting from an enzyme defect are highlighted in pink. This pathway was inspired by Chapter 8 of the book of Blau (ISBN 3642403360 (978-3642403361)).
Authors
Britt Pieters , Denise Slenter , Eveline Schoenmaker , Irene Hemel , Egon Willighagen , Friederike Ehrhart , Eric Weitz , and Finterly HuCited In
Are you planning to include this pathway in your next publication? See How to Cite and add a link here to your paper once it's online.
Organism
Homo sapiensCommunities
Inborn Errors of Metabolism (IEM) Pathways Rare DiseasesAnnotations
Disease Ontology: D-2-hydroxyglutaric aciduria organic acidemia Canavan disease 2-hydroxyglutaric aciduria
Pathway Ontology: lysine degradation pathway disease pathway glutaric aciduria type I pathway
Participants
Label | Type | Compact Identifier | Comment |
---|---|---|---|
hydroxylysine | Metabolite | chebi:60175 | |
Tryptophan | Metabolite | chebi:16828 | |
Glutaric acid | Metabolite | chebi:17859 | |
Glutaconyl coenzyme A | Metabolite | chebi:57353 | AKA trans-4-carboxybut-2-enoyl-CoA |
3-Hydroxyglutaric acid | Metabolite | chebi:39980 | |
FAD | Metabolite | chebi:16238 | |
NADPH | Metabolite | chebi:16474 | |
Acetyl coenzyme A | Metabolite | chebi:15351 | |
glutaryl-coenzyme A | Metabolite | chebi:15524 | |
L-2-Aminoadipic acid | Metabolite | chebi:37024 | |
FADH2 | Metabolite | chebi:17877 | |
Glutaconic acid | Metabolite | chebi:24309 | |
NADPH+ | Metabolite | hmdb:HMDB0000221 | |
L-2-Hydroxyglutaric acid | Metabolite | hmdb:HMDB0000694 | |
NADH | Metabolite | chebi:16908 | |
2-Oxoadipic acid | Metabolite | chebi:15753 | |
L-N-Acetylaspartate | Metabolite | chebi:21547 | |
H+ | Metabolite | chebi:15378 | |
Aspartate | Metabolite | chebi:17053 | |
Coenzyme A | Metabolite | chebi:15346 | |
lysine | Metabolite | chebi:25094 | |
2-Ketoglutaric acid | Metabolite | chebi:30915 | AKA 2-ketoglutarate, 2-oxoglutarate, 2-oxopentanedioic acid, α-ketoglutarate |
Crotonyl CoA | Metabolite | chebi:57332 | AKA (E)-but-2-enoyl-CoA |
NAD+ | Metabolite | chebi:15846 | |
D-2-Hydroxyglutaric acid | Metabolite | chebi:15801 | |
2-aminoadipic semialdehyde | Metabolite | chebi:61515 | |
Aspartate | Metabolite | chebi:17053 | |
Acetyl coenzyme A | Metabolite | chebi:15351 | |
glutarylcarnitine | Metabolite | chebi:73040 | |
3-hydroxyglutaryl CoA | Metabolite | pubchem.compound:445127 | |
Antiquitin | Protein | ensembl:ENSG00000164904 | |
IDH2 | Protein | ensembl:ENSG00000182054 | |
D-2-hydroxyglutarate dehydrogenase | Protein | uniprot:Q8N465 | |
L2HGDH | Protein | ensembl:ENSG00000087299 | |
L-malDH | Protein | uniprot:A0A024R4K3 | |
Hydroxyacid-oxoacid transhydrogenase | Protein | uniprot:B4DFI7 | |
Aminoacylase-2 | Protein | uniprot:A0A1B0GTG3 | Aka ACY1 |
Glutaryl-CoA dehydrogenase | Protein | uniprot:Q92947 |
References
- Blau N, Duran M, Gibson KM, Dionisi-Vici C. Physician’s Guide to the Diagnosis, Treatment, and Follow-Up of Inherited Metabolic Diseases [Internet]. Springer; 2014. 867 p. Available from: https://books.google.com/books/about/Physician_s_Guide_to_the_Diagnosis_Treat.html?hl=&id=wJRBnwEACAAJ OpenLibrary Worldcat
- Kvittingen EA, Guldal G, Børsting S, Skalpe IO, Stokke O, Jellum E. N-acetylaspartic aciduria in a child with a progressive cerebral atrophy. Clin Chim Acta. 1986 Aug 15;158(3):217–27. PubMed Europe PMC Scholia
- Chalmers RA, Lawson AM, Watts RW, Tavill AS, Kamerling JP, Hey E, et al. D-2-hydroxyglutaric aciduria: case report and biochemical studies. J Inherit Metab Dis. 1980;3(1):11–5. PubMed Europe PMC Scholia
- Hoffmann GF, Böhles HJ, Burlina A, Duran M, Herwig J, Lehnert W, et al. Early signs and course of disease of glutaryl-CoA dehydrogenase deficiency. J Inherit Metab Dis. 1995;18(2):173–6. PubMed Europe PMC Scholia
- BANKER BQ, ROBERTSON JT, VICTOR M. SPONGY DEGENERATION OF THE CENTRAL NERVOUS SYSTEM IN INFANCY. Neurology. 1964 Nov;14:981–1001. PubMed Europe PMC Scholia
- Rzem R, Van Schaftingen E, Veiga-da-Cunha M. The gene mutated in l-2-hydroxyglutaric aciduria encodes l-2-hydroxyglutarate dehydrogenase. Biochimie. 2006 Jan;88(1):113–6. PubMed Europe PMC Scholia
- Hedlund GL, Longo N, Pasquali M. Glutaric acidemia type 1. Am J Med Genet C Semin Med Genet. 2006 May 15;142C(2):86–94. PubMed Europe PMC Scholia
- Arun P, Moffett JR, Namboodiri AMA. Evidence for mitochondrial and cytoplasmic N-acetylaspartate synthesis in SH-SY5Y neuroblastoma cells. Neurochem Int. 2009 Sep;55(4):219–25. PubMed Europe PMC Scholia
- Kranendijk M, Struys EA, van Schaftingen E, Gibson KM, Kanhai WA, van der Knaap MS, et al. IDH2 mutations in patients with D-2-hydroxyglutaric aciduria. Science. 2010 Oct 15;330(6002):336. PubMed Europe PMC Scholia