lipidmaps-wp-curation
WikiPathways WP3933
- WikiPathways: WP3933 (classic)
- Species: Homo sapiens
- Scholia: WP3933
- WPRDF file: wp/Human/WP3933.ttl
- GPMLRDF file: wp/gpml/Human/WP3933.ttl
- SBML file: sbml/WP3933.sbml (SVG) (conversion notes)
Tests
- CASMetabolitesTests: all 2 tests OK!
- ChEBIMetabolitesTests: all 5 tests OK!
- ChemSpiderTests: all 2 tests OK!
- DataNodesTests: all 5 tests OK!
- EnsemblTests: all 4 tests OK!
- GeneTests: all 5 tests OK!
- GeneralTests: all 15 tests OK!
- HMDBMetabolitesTests: all 1 tests OK!
- HMDBSecMetabolitesTests: all 3 tests OK!
- InteractionTests: all 9 tests OK!
- KEGGMetaboliteTests: all 2 tests OK!
- LIPIDMAPSTests
- retiredIdentifiers: .. all OK!
- onlyLIPIDMAPS: .x we found 1 problem(s):
- MetaboliteStructureTests: all 1 tests OK!
- MetabolitesTests: all 14 tests OK!
- OudatedDataSourcesTests: all 9 tests OK!
- PathwayTests: all 11 tests OK!
- ProteinsTests: all 2 tests OK!
- PubChemMetabolitesTests: all 3 tests OK!
- ReferencesTests: all 6 tests OK!
- UniProtTests: all 5 tests OK!
- WikidataTests: all 14 tests OK!
Summary
- Number of test classes: 21
- Number of tests: 120
- Number of assertions: 241
- Number of fails: 1
Fails
Only LIPID MAPS identifiers
Expected a LIPID MAPS identifier, but found other identifiers: 20
http://classic.wikipathways.org/instance/WP3933_rr137957 ATP has 1927-31-7 from CAS but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP3933_rr137957 CTP has 2056-98-6 from CAS but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP3933_rr137957 ADP has 58-64-0 from CAS but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP3933_rr137957 SAM has C00019 from KEGG Compound but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP3933_rr137957 SAH has C00021 from KEGG Compound but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP3933_rr137957 L-Serine has C00065 from KEGG Compound but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP3933_rr137957 Choline has C00114 from KEGG Compound but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP3933_rr137957 Ethanolamine has C00189 from KEGG Compound but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP3933_rr137957 CDP-choline has C00307 from KEGG Compound but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP3933_rr137957 O-Phosphoethanolamine has C00346 from KEGG Compound but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP3933_rr137957 Phosphatidylethanolamine has C00350 from KEGG Compound but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP3933_rr137957 CDP-Ethanolamine has C00570 from KEGG Compound but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP3933_rr137957 Phosphatidylserine has C02737 from KEGG Compound but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP3933_rr137957 CMP has CHEBI:17361 from ChEBI but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP3933_rr137957 DAG has CHEBI:18035 from ChEBI but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP3933_rr137957 Phosphocholine has CHEBI:18132 from ChEBI but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP3933_rr137957 Sphingolipid has CHEBI:26739 from ChEBI but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP3933_rr137957 AAG has CHEBI:73341 from ChEBI but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP3933_rr137957 PPi has Q290828 from Wikidata but expected a LIPID MAPS identifier
http://classic.wikipathways.org/instance/WP3933_rr137957 Phosphatidylcholines has Q650187 from Wikidata but expected a LIPID MAPS identifier
More details at https://www.wikipathways.org/WikiPathwaysCurator/LIPIDMAPSTests/onlyLIPIDMAPS