Sandbox Pathway (Homo sapiens)

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Revision as of 19:18, 12 December 2011 by Khanspers (Talk | contribs)
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Curation Tags


Sandbox pathway for testing.



Ontology Tags



  1. Kelder T, Conklin BR, Evelo CT, Pico AR; ''Finding the right questions: exploratory pathway analysis to enhance biological discovery in large datasets.''; PLoS Biol, 2010 PubMed
  2. Kelder T, Pico AR, Hanspers K, van Iersel MP, Evelo C, Conklin BR; ''Mining biological pathways using WikiPathways web services.''; PLoS One, 2009 PubMed
  3. Kelder T, van Iersel MP, Hanspers K, Kutmon M, Conklin BR, Evelo CT, Pico AR; ''WikiPathways: building research communities on biological pathways.''; Nucleic Acids Res, 2012 PubMed
  4. Pico AR, Kelder T, van Iersel MP, Hanspers K, Conklin BR, Evelo C; ''WikiPathways: pathway editing for the people.''; PLoS Biol, 2008 PubMed


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79648view07:00, 1 April 2015MaintBotBot edit test
79085view08:00, 1 March 2015MaintBotBot edit test
79069view17:20, 27 February 2015NunoSpecify description
79068view17:15, 27 February 2015Mkutmontest
78963view23:46, 17 February 2015KhanspersOntology Term : 'DOID:4' removed !
78818view08:00, 1 February 2015MaintBotBot edit test
78600view01:09, 8 January 2015AlexanderPicoOntology Term : 'DOID:344' removed !
78325view08:00, 1 January 2015MaintBotBot edit test
78206view11:15, 12 December 2014MkutmonOntology Term : 'Disease' added !
78205view11:09, 12 December 2014MkutmonOntology Term : 'DOID:4' removed !
78204view11:09, 12 December 2014Mkutmonadd data node test
78083view08:00, 1 December 2014MaintBotBot edit test
77960view07:00, 1 November 2014MaintBotBot edit test
77638view07:00, 1 October 2014MaintBotBot edit test
77569view16:40, 28 September 2014AlexanderPicotest changes via PV-WP plugin
77490view21:33, 16 September 2014MaintBotremoved extra node
77489view18:55, 16 September 2014KhanspersReverted to version '18:10, 7 September 2014' by Khanspers
77480view21:43, 15 September 2014Khansperstest
77420view18:10, 7 September 2014EgonwTrigger save to regenerate imagery.
77418view09:13, 7 September 2014EgonwMade glucose fat.
77373view07:00, 1 September 2014MaintBotBot edit test
77324view00:20, 16 August 2014Ariuttaadd long text
76313view07:00, 1 July 2014MaintBotBot edit test
76195view22:57, 16 June 2014MaintBotdifferent grey for mitochondria
76166view18:14, 13 June 2014AlexanderPicoReverted to version '11:59, 7 April 2014' by AlexanderPico
75470view19:43, 2 June 2014AriuttaModified title
75469view19:42, 2 June 2014Ariutta
75468view19:41, 2 June 2014Ariuttaremove old biopax
75467view19:40, 2 June 2014Ariuttaremove old biopax
75466view19:35, 2 June 2014Ariuttajust a protein
75465view07:00, 1 June 2014MaintBotBot edit test
75376view23:20, 20 May 2014Ariuttapasted from elbow test protocol
75375view23:19, 20 May 2014Ariuttapasted from test protocol
75250view19:32, 13 May 2014MkutmonTesting
75177view16:54, 8 May 2014MkutmonOntology Term : 'Pathway Ontology' added !
74851view07:00, 1 May 2014MaintBotBot edit test
74526view23:05, 28 April 2014KhanspersModified description
74463view22:16, 23 April 2014Khansperschanged xref
74462view22:05, 23 April 2014Khanspersremoved extra object
74456view18:10, 21 April 2014Khanspersadded an object with large x/y coords
74455view18:09, 21 April 2014Khansperstesting zoom
74371view20:34, 15 April 2014Ariuttaupdate arc tests
74368view19:55, 15 April 2014Ariuttaadded rotated arcs
74357view19:31, 15 April 2014Ariuttaadd bboxes for arcs
74356view19:22, 15 April 2014Ariuttachanged arc color
74355view19:21, 15 April 2014Ariuttaadded arcs
74351view18:21, 15 April 2014Khanspersadded auto-catalysis example
74224view03:35, 8 April 2014Ariuttachange other connectors to straight so they look better
74223view03:34, 8 April 2014Ariuttachange connector to straight line
74220view18:59, 7 April 2014AlexanderPicoUpdating example with a state

External references

View all...
NameTypeDatabase referenceComment
MYLK2GeneProduct85366 (Entrez Gene) KML2 MOUSE
ATP2A2GeneProduct488 (Entrez Gene)
OXTGeneProduct5020 (Entrez Gene) MGI:97453
PDE4DGeneProduct5144 (Entrez Gene)
ACTBGeneProduct60 (Entrez Gene)
ADMRGeneProduct11318 (Entrez Gene)
ABCA1GeneProductENSG00000165029 (Ensembl Human)
RCP9GeneProduct27297 (Entrez Gene)
p53R2GeneProduct50484 (Entrez Gene)
EZH2GeneProduct2146 (Entrez Gene)
ADPMetabolite58-64-0 (CAS)
ADH1AGeneProduct249 (HUGO)
GSTO1GeneProduct9446 (Entrez Gene)
CACNB3GeneProduct784 (Entrez Gene)
CMKOR1GeneProduct57007 (Entrez Gene) PMID: 10614663
GUCA2BGeneProduct2981 (Entrez Gene)
LGR7GeneProduct59350 (Entrez Gene) PMID: 11809971
AKAP10GeneProduct11216 (Entrez Gene)
GNAQGeneProduct2776 (Entrez Gene)
ATP2A3GeneProduct489 (Entrez Gene)
CORIN2GeneProduct10699 (Entrez Gene) MGI:97367
OXTRGeneProduct5021 (Entrez Gene)
NOS1GeneProduct4842 (Entrez Gene) PMID: 11854458
DGKZGeneProduct8525 (Entrez Gene)
NOS3GeneProduct4846 (Entrez Gene) PMID: 11854458
Cyclic GMPMetaboliteHMDB01314 (HMDB)
ACTA2GeneProduct59 (Entrez Gene)
Cyclic AMPMetaboliteHMDB00058 (HMDB)
CALCAGeneProduct796 (Entrez Gene) CRF HUMAN PMID: 11854458
GNASGeneProduct2778 (Entrez Gene)
LGR8GeneProduct122042 (Entrez Gene) PMID: 11809971 LGR8 MOUSE
CRHR1GeneProduct1394 (Entrez Gene)
RLN1GeneProduct6013 (Entrez Gene)
ACTCGeneProduct70 (Entrez Gene)
GUCA2AGeneProduct2980 (Entrez Gene)
CNN1GeneProduct1264 (Entrez Gene)
SLC8A1GeneProduct6546 (Entrez Gene)
GUCY1A3GeneProductENSG00000164116 (Ensembl Human) PMID: 11854458
ATPMetabolite1927-31-7 (CAS)
Grouped item 1GeneProduct
ADMMetabolite133 (ChEBI)
PDE4BGeneProduct5142 (Entrez Gene)
EDG2GeneProduct1902 (Entrez Gene)
Grouped item 3GeneProduct
GUCY2EGeneProduct2985 (Entrez Gene) PMID: 11854458
CRHGeneProduct1392 (Entrez Gene) CRF HUMAN PMID: 11854458
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