Pathway wishlist

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Suggested pathway nameSuggested by userSuggested on dateCommentsVotes
Estrogen receptor mediated regulationEvelo 2007112814371514:37, 28 November 2007

We want to use this to evaluate ChIP data from Andrea. There is a Biocarta ...more

0
Protein Translation RegulationEvelo 2007111909395309:39, 19 November 2007

Should be centered around AKT, mTOR.

1
Folate BiosynthesisEvelo 2007110811381111:38, 8 November 2007

Folate is an input for for the one carbon pathway. There is a KEGG pathway ...more

0
Purine MetabolismEvelo 2007110811321611:32, 8 November 2007

Was mentioned on the one methyl (DNA methylation) pathway, but we don't hav...more

0
CX3CR1 signallingArunkhs 2010010413363513:36, 4 January 2010

Cx3Cr1 chemokine signalling is important in atherosclerosis

0
Sodium/chlorine ion transport in the kidneyEvelo 2007110908221008:22, 9 November 2007

Came up during discussion with professor Harry Struijker-Boudier about path...more

0
Vasopressin metabolismEvelo 2007110908191508:19, 9 November 2007

Came up during discussion with professor Harry Struijker-Boudier about path...more

0
Pyrimidine MetabolismEvelo 2007110811323511:32, 8 November 2007

Was mentioned on the one methyl (DNA methylation) pathway, but we don't hav...more

0
N-glycan biosynthesisDalloliogm 2009102712012012:01, 27 October 2009

The most common form of modification for proteins in the secretory pathway ...more

0
Retinal developmentLringland 2009081114201614:20, 11 August 2009

H. Sapiens. esp transcription factors

0
HistoneEpigenomicPathwayFJANAT 2009041008034508:03, 10 April 2009

Histones are the major nuclear protein. Histone proteins get modified at va...more

1
Plant root and shootCharly 2009021910582610:58, 19 February 2009

Development of root and shoot, preferably Arabidopsis


This is a great req...more

0
Betalain BiosynthesisAxel 2009012313340313:34, 23 January 2009

Betalain biosynthesis, in contrast to Anthocyanin biosynthesis, is limited ...more

0
Plant flavonoid biosynthesisAxel 2008111804503604:50, 18 November 2008

Flavonoid biosynthesis is one of best studied secondary metabolite pathways...more

1
Cholinergic Signaling PathwayPolz7 2008101618442618:44, 16 October 2008

Especially interested in nAChRs

0
Plant lipid biosynthesisAflaloc 2008101612591212:59, 16 October 2008

With the renewed interest in biodiesel production by Plants/Algae, it would...more

2
Staphylococcus aureus and Bacillus subtilis species entryBernhardt 2008092610020110:02, 26 September 2008
1
Osteocyte Gene NetworkSharri6 2008092521210421:21, 25 September 2008

Osteocytes have been hard to study because they are buried in the bone. Ost...more

1
BMP signaling in osteoblastsSharri6 2008092521160421:16, 25 September 2008

BMP2 and BMP4 are critical ligands that signal through bmp type ii and type...more

0
Ceramide BiosynthesisKRamos 2008090323445723:44, 3 September 2008

H.sapiens or S.cerevisiae

1
Interferon, type IIMarkus 2008080623542323:54, 6 August 2008

including alternative, non-canonical signaling pathways

0
Interferon, type IMarkus 2008080623534423:53, 6 August 2008
0
Sterol regulator element binding protein (SREBP) pathwayEvelo 2008050908255508:25, 9 May 2008

Controls, by transcriptional regulation,uptake of cholesterol via LDL recep...more

1
Neuro development protein foldingBruceConklin 2008032804502004:50, 28 March 2008

Neuro development involves many factors, this pathway would focus on protei...more

0
Neuro development mitochondriaBruceConklin 2008032804484704:48, 28 March 2008

Neuro development involves many factors, this pathway would focus on mitoch...more

1
Neuro development transmembrane signalingBruceConklin 2008032804455204:45, 28 March 2008

Neuro development involves many factors, this pathway would focus on trans...more

0
Neurodevelopment-transcription factorsBruceConklin 2008032804443804:44, 28 March 2008

Neurodevelopment involves many factors, this pathway would focus on transc...more

2
Axonal guidanceBruceConklin 2008011920324620:32, 19 January 2008

axonal guidance systems are required for proper wiring of the nervous syste...more

1
Blood vessel formationBruceConklin 2008011920294220:29, 19 January 2008

Blood vessel formation or vasculogenesis is well studied, and involves defi...more

2
ChemotaxisBruceConklin 2008011920275020:27, 19 January 2008

Chemotaxis involves many cell types and receptors. Chemotaxis by neutrophi...more

2
Atrium diuretic factorEvelo 2007110908145208:14, 9 November 2007

Came up during discussion with professor Harry Struijker-Boudier about path...more

0

Resolved items

Suggested pathway nameSuggested by userSuggested on dateResolved by pathway nameResolved by userResolved on date
DNA damage responseEvelo2009050410193910:19, 4 May 2009

DNA damage response (Homo sapiens)

I3790772010030418162818:16, 4 March 2010
Aldosteron metabolismEvelo2008010909350109:35, 9 January 2008

Biosynthesis of Aldosterone and Cortisol (Rattus norvegicus)

Thomas2008040114275714:27, 1 April 2008
TOR signalingBruceConklin2010030109320809:32, 1 March 2010

TOR signaling (Homo sapiens)

Pieter Giesbertz2010030312380612:38, 3 March 2010
Renin/Angiotensin systemEvelo2008031910381010:38, 19 March 2008

Renin - Angiotensin System (Rattus norvegicus)

Rishiaachaibersing2008040507145607:14, 5 April 2008
DNA RepairEvelo2008010909480609:48, 9 January 2008

Homologous recombination (Homo sapiens)

Thomas2010030110065510:06, 1 March 2010
PlantsAxel2009012310225910:22, 23 January 2009

Ureide biosynthesis (Oryza sativa)

Thomas2009012310464410:46, 23 January 2009
Zebrafish as speciesSFGKrens2008051508460808:46, 15 May 2008

ACE Inhibitor Pathway (Danio rerio)

C.F.Thorn2008052110090610:09, 21 May 2008
Ce Glucolysis GluconeogenesisMartijnVanIersel2008070112591112:59, 1 July 2008

Glycolysis (Caenorhabditis elegans)

Jaeckel2008072404485804:48, 24 July 2008
Ce INSRMartijnVanIersel2008022112293312:29, 21 February 2008

daf-2 or insulin signaling pathway (Caenorhabditis elegans)

MartijnVanIersel2008022113032913:03, 21 February 2008
Catechol Amine SynthesisEvelo2008032413275613:27, 24 March 2008

Catecholamine synthesis (Rattus norvegicus)

Annemichielsen2008040507154407:15, 5 April 2008
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