Fatty Acid Beta Oxidation (Homo sapiens)

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Curation Tags

Description

Complete fatty acid beta-oxidation pathway for saturated and unsaturated fatty acids, developed and curated internally by BiGCaT Bioinformatics. This pathway was previously split into three parts plus a meta file for statistics. If you still have these you can replace all four with this single pathway.

Ontology Tags

 

Bibliography

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History

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CompareRevisionActionTimeUserComment
71172view11:13, 11 October 2013Mkutmonfix unconnected lines
70676view19:04, 26 August 2013Mkutmonconnected lines
68951view17:37, 8 July 2013MaintBotUpdated to 2013 gpml schema
59762view15:10, 7 March 2013EgonwConverted Labels into DataNode's.
56441view21:35, 7 January 2013EgonwAdded missing data source info for three data nodes.
45258view18:42, 7 October 2011AlexanderPicoOntology Term : 'fatty acid metabolism' added !
45257view18:42, 7 October 2011AlexanderPicoOntology Term : 'fatty acid metabolic pathway' added !
45256view18:42, 7 October 2011AlexanderPicoOntology Term : 'fatty acid degradation pathway' added !
45255view18:41, 7 October 2011AlexanderPicoOntology Term : 'fatty acid beta degradation pathway' added !
43430view15:34, 21 June 2011AdrienDefayChange all the TCA text label to a Pathway node with the gene ID and the correct database.
41108view23:22, 1 March 2011MaintBotRemoved redundant pathway information and comments
39785view15:47, 18 January 2011FerryJagersPeriodical save, work in progress
39784view15:37, 18 January 2011FerryJagersPeriodical save, work in progress
39783view15:27, 18 January 2011FerryJagersPeriodical save, work in progress
39782view14:55, 18 January 2011FerryJagersPeriodical save, work in progress
32874view22:19, 16 September 2009MaintBotChanged type for metabolites
31971view13:08, 14 August 2009MaintBotFixed group labels
20983view11:30, 14 November 2008MaintBot[[Pathway:Homo sapiens:Fatty Acid Beta-oxidation BiGCaT]] moved to [[Pathway:WP143]]: Moved to stable identifier
14286view08:56, 22 May 2008Pahlesgrouping and connections ready, metabolites need to be checked
14155view15:38, 21 May 2008PahlesGrouping genes, connecting to reactions
14153view15:35, 21 May 2008PahlesPeriodical save, work in progress
14151view15:25, 21 May 2008PahlesPeriodical save, work in progress
14123view14:20, 21 May 2008Pahlespartly curated
14091view12:03, 21 May 2008SusanSmall adaption
13066view11:12, 17 May 2008MaintBotautomated metabolite conversion
11784view09:24, 29 April 2008MichielResized to make GenMAPP compatible
11777view18:52, 28 April 2008EveloModified description
10773view09:54, 22 February 2008MichielPosition correction
10772view09:48, 22 February 2008MichielModified description
10771view09:47, 22 February 2008MichielSpecify description
10770view09:43, 22 February 2008MichielCorrected unsaturated path
10769view09:38, 22 February 2008MichielAdded unsaturated fatty acid metabolism
10656view12:20, 21 February 2008Michiel
10650view12:07, 21 February 2008Michiel[[Pathway:Homo sapiens:Fatty Acid Beta-Oxidation]] moved to [[Pathway:Homo sapiens:Fatty Acid Beta-oxidation BiGCaT]]
10647view11:52, 21 February 2008MichielModified description
10645view11:48, 21 February 2008MichielCreation

External references

View all...
NameTypeDatabase referenceComment
Hexanoyl-CoAMetaboliteCHEBI:27540 (ChEBI)
2-trans-4-cis-decadienoyl-CoAMetaboliteCHEBI:29119 (ChEBI)
GlutarateMetabolite743 (PubChem-compound)
Acyl-CoAMetabolite9029-97-4 (CAS)
TPI1GeneProduct7167 (Entrez Gene)
3-Oxopalmitoyl-CoAMetaboliteCHEBI:15491 (ChEBI)
GKGeneProduct2710 (Entrez Gene)
DCIGeneProduct1632 (Entrez Gene)
GK2GeneProduct2712 (Entrez Gene)
Acetoacetyl-CoAMetabolite1420-36-6 (CAS)
GPD2GeneProduct2820 (Entrez Gene)
L-Glycerol-3-PhosphateMetaboliteCHEBI:15978 (ChEBI)
CPT2GeneProduct1376 (Entrez Gene)
Decanoyl-CoAMetaboliteCHEBI:28493 (ChEBI)
CPT1AGeneProduct1374 (Entrez Gene)
(S)-3-Hydroxybutanoyl-CoAMetaboliteCHEBI:15453 (ChEBI)
CHKBGeneProduct1120 (Entrez Gene)
GlycerolMetabolite56-81-5 (CAS)
SLC25A20GeneProduct788 (Entrez Gene)
Acetyl-CoAMetabolite72-89-9 (CAS)
CRATGeneProduct1384 (Entrez Gene)
Linoleoyl-CoAMetabolite40757-80-0 (CAS)
ACSL1GeneProduct2180 (Entrez Gene)
Trans-Dec-2-enoyl-CoAMetaboliteCHEBI:10723 (ChEBI)
ACAS2GeneProduct55902 (Entrez Gene)
TriacylglycerolMetaboliteCHEBI:17855 (ChEBI)
ACSL3GeneProduct2181 (Entrez Gene)
(S)-3-Hydroxytetradecanoyl-CoAMetaboliteCHEBI:27466 (ChEBI)
ACSL4GeneProduct2182 (Entrez Gene)
(S)-3-Hydroxyoctanoyl-CoAMetaboliteCHEBI:28632 (ChEBI)
ACSL5GeneProduct51703 (Entrez Gene)
3-Oxohexanoyl-CoAMetaboliteCHEBI:27648 (ChEBI)
ACSL6GeneProduct23305 (Entrez Gene)
3-Oxododexanoyl-CoAMetabolite440604 (PubChem-compound)
CPT1BGeneProduct1375 (Entrez Gene)
DECR1GeneProduct1666 (Entrez Gene)
ACADVLGeneProduct37 (Entrez Gene)
Dihydroxyacetone PhosphateMetabolite57-04-5 (CAS)
HADHAGeneProduct3030 (Entrez Gene)
Glyceraldehyde-3-PhosphateMetabolite591-57-1 (CAS)
HADHBGeneProduct3032 (Entrez Gene)
Lauroyl-CoAMetabolite6244-92-4 (CAS)
ACADLGeneProduct33 (Entrez Gene)
Glutaryl-CoAMetabolite103192-48-9 (CAS)
ECHS1GeneProduct1892 (Entrez Gene)
cis,cis-3,6-Dodecadienoyl-CoAMetaboliteCHEBI:28002 (ChEBI)
HADHSCGeneProduct3033 (Entrez Gene)
3-trans-decenoyl-CoAMetaboliteCHEBI:29126 (ChEBI)
LIPEGeneProduct3991 (Entrez Gene)
(S)-3-Hydroxydecanoyl-CoAMetaboliteCHEBI:28325 (ChEBI)
LIPCGeneProduct3990 (Entrez Gene)
Palmitoyl-CoAMetaboliteCHEBI:15525 (ChEBI)
PNPLA2GeneProduct57104 (Entrez Gene)
(S)-3-Hydroxyhexadecanoyl-CoAMetaboliteCHEBI:27402 (ChEBI)
LIPFGeneProduct8513 (Entrez Gene)
Myristoyl-CoAMetaboliteCHEBI:15532 (ChEBI)
LPLGeneProduct4023 (Entrez Gene)
2-trans-dodecenoyl-CoAMetaboliteCHEBI:15471 (ChEBI)
ACADMGeneProduct34 (Entrez Gene)
Trans-Oct-2-enoyl-CoAMetaboliteCHEBI:27537 (ChEBI)
ACADSGeneProduct35 (Entrez Gene)
3-Oxo-octanoyl-CoAMetaboliteCHEBI:28264 (ChEBI)
GCDHGeneProduct2639 (Entrez Gene)
Trans-Hex-2-enoyl-CoAMetaboliteCHEBI:28706 (ChEBI)
DLDGeneProduct1738 (Entrez Gene)
Butanoyl-CoAMetaboliteCHEBI:15517 (ChEBI)
ACAT1GeneProduct38 (Entrez Gene)
TCA cyclePathwayWP78 (WikiPathways)
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